STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3I223_ANAPPBTB domain-containing protein. (589 aa)    
Predicted Functional Partners:
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.623
KLHDC8B
Kelch domain containing 8B.
  
 
  0.503
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.488
RBX1
Ring-box 1.
    
 0.477
KBTBD8
Kelch repeat and BTB domain containing 8.
  
 
0.477
U3IN17_ANAPP
Uncharacterized protein.
  
 
 
0.453
GAN
Gigaxonin.
  
 
 
0.445
UBXN7
UBX domain-containing protein 7.
    
  0.444
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.443
UBE2F
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.432
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.