STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3I252_ANAPPSEC7 domain-containing protein. (1044 aa)    
Predicted Functional Partners:
ARFGEF1
DUF1981 domain-containing protein.
 
     0.939
ARL1
ADP ribosylation factor like GTPase 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.727
SEC63
SEC63 homolog, protein translocation regulator.
   
  
 0.623
WDR44
WD repeat domain 44.
      
 0.592
NHSL2
NHS like 2.
      
 0.591
AP1AR
Adaptor related protein complex 1 associated regulatory protein.
      
 0.519
ARFGEF2
ADP ribosylation factor guanine nucleotide exchange factor 2.
  
  
0.497
PRPF4B
Pre-mRNA processing factor 4B.
   
  
 0.482
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
   
 0.469
ATAD2B
ATPase family AAA domain containing 2B.
   
  
 0.463
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.