Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GSG1Germ cell associated 1. (315 aa)    
Predicted Functional Partners:
U3I908_ANAPP
Uncharacterized protein.
   
  
 0.626
VWC2
Von Willebrand factor C domain containing 2.
      
 0.577
NRN1
Uncharacterized protein.
      
 0.545
CNIH1
Cornichon family AMPA receptor auxiliary protein 1.
      
 0.486
CNIH3
Cornichon family AMPA receptor auxiliary protein 3.
      
 0.485
SYNDIG1L
Synapse differentiation inducing 1 like.
      
 0.476
MFSD10
Uncharacterized protein.
      
 0.463
CPLX3
Complexin 3.
      
 0.445
SYNDIG1
Synapse differentiation inducing 1.
      
 0.444
PPID
Peptidylprolyl isomerase D.
      
 0.440
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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