STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRIG2Leucine rich repeats and immunoglobulin like domains 2. (1079 aa)    
Predicted Functional Partners:
LRIG1
Leucine rich repeats and immunoglobulin like domains 1.
   
   0.829
HPSE2
Heparanase 2 (inactive).
      
 0.669
TDRD3
Tudor domain containing 3.
      
 0.667
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.655
MST1R
Macrophage stimulating 1 receptor.
    
 0.655
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
      
 0.638
SYDE2
Synapse defective Rho GTPase homolog 2.
      
 0.637
SUPT7L
SPT7 like, STAGA complex gamma subunit.
      
 0.622
KLHL31
Kelch like family member 31.
     
 0.621
PCGF6
Polycomb group ring finger 6.
   
 
 0.603
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.