STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2CD2C2 calcium dependent domain containing 2. (722 aa)    
Predicted Functional Partners:
ARHGAP10
Rho GTPase activating protein 10.
    
   0.941
TMCO4
Transmembrane and coiled-coil domains 4.
      
 0.853
ARHGAP26
Rho GTPase activating protein 26.
    
   0.827
TM2D1
TM2 domain containing 1.
      
 0.748
NBAS
Neuroblastoma amplified sequence.
      
 0.741
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.703
TRDMT1
tRNA aspartic acid methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.664
STX18
Syntaxin 18.
      
 0.648
REEP3
Receptor expression-enhancing protein.
      
 0.642
KLHL29
Kelch like family member 29.
      
 0.641
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.