STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGM2Transglutaminase 2. (695 aa)    
Predicted Functional Partners:
ENSAPLP00000016847
Uncharacterized protein.
    
 0.579
COL15A1
Collagen type XV alpha 1 chain.
   
 
 0.552
COL7A1
Uncharacterized protein.
    
 0.549
FN1
Fibronectin 1.
    
 0.533
COL12A1
Collagen type XII alpha 1 chain.
    
 0.473
COL14A1
Collagen type XIV alpha 1 chain.
    
 0.459
COL5A2
Collagen type V alpha 2 chain.
    
 0.458
RHAG
Rh associated glycoprotein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
   
 
 0.452
ENSAPLP00000026847
Ammonium_transp domain-containing protein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
   
 
 0.452
ITGA11
Integrin subunit alpha 11; Belongs to the integrin alpha chain family.
      
 0.450
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.