Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TGM2Transglutaminase 2. (695 aa)    
Predicted Functional Partners:
FN1
Fibronectin 1.
    
 0.757
ENSAPLP00000016847
Uncharacterized protein.
    
 0.737
U3IHD8_ANAPP
Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
     
 0.577
F2
Uncharacterized protein; Belongs to the peptidase S1 family.
    
 0.568
ENSAPLP00000021937
Ammonium_transp domain-containing protein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
   
 
 0.544
ENSAPLP00000029084
Uncharacterized protein; Belongs to the peptidase S1 family.
    
 0.544
SERPIND1
Serpin family D member 1; Belongs to the serpin family.
     
 0.528
COL15A1
Collagen type XV alpha 1 chain.
   
 
 0.519
COL7A1
Uncharacterized protein.
    
 0.519
SURF1
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
      
 0.506
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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