STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBP3Retinol binding protein 3. (1648 aa)    
Predicted Functional Partners:
CLUL1
Clusterin; Belongs to the clusterin family.
   
  
 0.860
TULP1
TUB like protein 1; Belongs to the TUB family.
   
  
 0.613
MAFA
MAF bZIP transcription factor A.
      
 0.586
SERPIND1
Serpin family D member 1; Belongs to the serpin family.
      
 0.562
IMPG1
Interphotoreceptor matrix proteoglycan 1.
   
  
 0.556
U3I8R2_ANAPP
Uncharacterized protein.
      
 0.551
RHO
Rhodopsin.
   
  
 0.521
U3ICB9_ANAPP
Rhodopsin.
   
  
 0.521
OPTC
Opticin.
   
  
 0.509
RGR
Retinal G protein coupled receptor.
   
  
 0.504
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.