STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3I2X0_ANAPPUncharacterized protein. (515 aa)    
Predicted Functional Partners:
CCDC39
Coiled-coil domain containing 39.
    
 
 0.778
LRRC6
Leucine rich repeat containing 6.
   
 
 0.757
DNAAF1
Dynein assembly factor 1, axonemal.
    
 
 0.749
DRC7
Dynein regulatory complex subunit 7.
      
 0.721
ARMC4
Armadillo repeat containing 4.
    
 
 0.689
CCDC65
Coiled-coil domain containing 65.
   
 
 0.681
RSPH4A
Radial spoke head 6 homolog A.
   
 
 0.671
RSPH1
Radial spoke head component 1.
   
 
 0.657
U3I908_ANAPP
Uncharacterized protein.
   
  
 0.654
CCNO
Cyclin O; Belongs to the cyclin family.
   
 
 0.651
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.