STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D22BUncharacterized protein. (226 aa)    
Predicted Functional Partners:
TBC1D22B-2
Rab-GAP TBC domain-containing protein.
 
      0.899
ACBD3
Acyl-CoA binding domain containing 3.
    
 
 0.728
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.712
MRPS9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
 
 0.599
MRPS5
Mitochondrial ribosomal protein S5.
   
   0.595
MRPS16
Mitochondrial ribosomal protein S16.
    
   0.574
TBC1D19
TBC1 domain family member 19.
      
 0.552
ENSAPLP00000028201
Rab-GAP TBC domain-containing protein.
      
 0.547
ARFRP1
ADP ribosylation factor related protein 1.
   
   0.543
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.538
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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