STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D22BUncharacterized protein. (226 aa)    
Predicted Functional Partners:
TBC1D22B-2
Rab-GAP TBC domain-containing protein.
 
      0.899
GJD4
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.627
CCNY
Cyclin Y; Belongs to the cyclin family.
      
 0.609
LEPROTL1
Leptin receptor overlapping transcript like 1.
      
 0.597
NOVA1
NOVA alternative splicing regulator 1.
      
 0.593
PPP1R3D
Protein phosphatase 1 regulatory subunit 3D.
      
 0.592
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.547
ENSAPLP00000021993
Uncharacterized protein.
    
   0.528
GALR1
Galanin receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.489
SYCP2L
SYCP2_SLD domain-containing protein.
      
 0.489
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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