Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC30BUncharacterized protein. (666 aa)    
Predicted Functional Partners:
IFT81
Intraflagellar transport 81.
   
 0.997
IFT88
Intraflagellar transport 88.
   
 0.995
IFT46
Intraflagellar transport 46.
    
 0.993
HSPB11
Heat shock protein family B (small) member 11.
    
 0.993
IFT52
Intraflagellar transport 52.
    
 0.991
IFT57
Intraflagellar transport 57.
   
 0.990
IFT74
Intraflagellar transport 74.
   
 0.990
IFT80
Intraflagellar transport 80.
   
 0.989
CLUAP1
Clusterin associated protein 1.
   
 0.988
IFT172
Intraflagellar transport 172.
   
 0.987
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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