STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC3BLeucine rich repeat containing 3B. (307 aa)    
Predicted Functional Partners:
LRRC20
Leucine rich repeat containing 20.
      
 0.593
STOX1
Storkhead box 1.
      
 0.573
ENSAPLP00000016699
Ig-like domain-containing protein.
   
 0.526
ROBO2
Roundabout guidance receptor 2.
   
 0.526
ROBO4
Uncharacterized protein.
   
 0.526
ROBO1
Roundabout guidance receptor 1.
   
 0.526
DUSP19
Dual specificity phosphatase 19; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
    
 
 0.497
COX7A2L
Cytochrome c oxidase subunit 7A2 like.
      
 0.485
TLE1
TLE family member 1, transcriptional corepressor.
    
 
 0.450
CBR4
Carbonyl reductase 4.
    
 
 0.446
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.