Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDF2Stromal cell derived factor 2. (217 aa)    
Predicted Functional Partners:
DNAJB11
J domain-containing protein.
   
 0.899
U3J188_ANAPP
Uncharacterized protein.
   
 
 0.705
DNAJC10
Uncharacterized protein.
   
 
 0.705
SNX1
Sorting nexin 1.
    
 
 0.704
SPAG1
Sperm associated antigen 1.
     
 0.659
CRELD2
Cysteine rich with EGF like domains 2.
   
 
 0.619
HSPA5
Heat shock protein family A (Hsp70) member 5; Belongs to the heat shock protein 70 family.
   
 
 0.592
RRAGB
Ras related GTP binding B.
      
 0.551
VDAC1
Voltage dependent anion channel 1.
    
 
 0.547
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
      
 0.546
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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