STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF2Stromal cell derived factor 2. (217 aa)    
Predicted Functional Partners:
DNAJB11
J domain-containing protein.
   
 0.865
WSCD1
WSC domain containing 1.
    
 
 0.636
ENSAPLP00000031682
Nfu_N domain-containing protein.
      
 0.622
SEZ6
Seizure related 6 homolog.
    
 
 0.616
NDUFAF4
NADH:ubiquinone oxidoreductase complex assembly factor 4.
      
 0.611
NDUFAF5
NADH:ubiquinone oxidoreductase complex assembly factor 5.
      
 0.611
DAG1
Dystroglycan 1.
    
 0.604
U3J188_ANAPP
Uncharacterized protein.
   
 
 0.582
DNAJC10
Uncharacterized protein.
   
 
 0.582
SPAG1
Sperm associated antigen 1.
     
 0.535
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.