Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYF6Myogenic factor 6. (359 aa)    
Predicted Functional Partners:
PAX7
Paired box 7.
   
 
 0.792
MEF2D
Myocyte enhancer factor 2D.
    
 0.748
ENSAPLP00000019874
MADS-box domain-containing protein.
    
 0.744
PAX3
Paired box 3.
   
 
 0.721
MSTN
Myostatin.
   
  
 0.692
DLX5
Distal-less homeobox 5.
      
 0.669
MEF2C
Myocyte enhancer factor 2C.
    
 0.654
TCF3
Transcription factor 3.
    
 0.632
TCF12
BHLH domain-containing protein.
    
 0.632
TCF4
Uncharacterized protein.
    
 0.632
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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