STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDHAF3Uncharacterized protein. (122 aa)    
Predicted Functional Partners:
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
    
 0.995
SDHAF4
Succinate dehydrogenase complex assembly factor 4.
   
 0.994
SDHA
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.988
ENSAPLP00000018384
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.978
PALB2
Partner and localizer of BRCA2.
   
 
 0.805
ENSAPLP00000030564
Uncharacterized protein.
   
 
 0.799
LYRM4
Uncharacterized protein; Belongs to the complex I LYR family.
     
 0.786
MIPEP
Mitochondrial intermediate peptidase.
   
  
 0.739
LYRM1
LYR motif containing 1; Belongs to the complex I LYR family.
      
 0.673
FXN
Frataxin.
     
 0.654
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.