Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LRRN3Leucine rich repeat neuronal 3. (708 aa)    
Predicted Functional Partners:
PTPRO
Uncharacterized protein.
    
 0.733
F2RL3
F2R like thrombin or trypsin receptor 3; Belongs to the G-protein coupled receptor 1 family.
    
 0.725
FRAS1
Uncharacterized protein.
   
 0.579
HAPLN1
Hyaluronan and proteoglycan link protein 1.
    
 0.508
NUDT4
Nudix hydrolase domain-containing protein.
      
 0.503
TIMP4
TIMP metallopeptidase inhibitor 4.
     
 0.502
LIMA1
LIM domain and actin binding 1.
      
 0.475
COL10A1
C1q domain-containing protein.
    
 0.462
VSTM5
V-set and transmembrane domain containing 5.
      
 0.460
IMMP2L
Inner mitochondrial membrane peptidase subunit 2.
      
 0.443
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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