STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC18A1Solute carrier family 18 member A1. (610 aa)    
Predicted Functional Partners:
RIMS2
C2 domain-containing protein.
     
 0.678
ENSAPLP00000029757
Uncharacterized protein.
     
 0.678
CHAT
Choline O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
 
 
  
 0.652
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
     
 0.640
IP6K2
Kinase; Belongs to the inositol phosphokinase (IPK) family.
      
 0.611
LZTS1
Leucine zipper tumor suppressor 1.
      
 0.611
OSBPL8
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.610
RNF123
Ring finger protein 123.
      
 0.609
PLPPR5
Phospholipid phosphatase related 5.
      
 0.602
CRAT
Carnitine O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
 
 
  
 0.587
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.