STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3I3C4_ANAPPUncharacterized protein. (570 aa)    
Predicted Functional Partners:
ENSAPLP00000017251
Uncharacterized protein.
   
  
 0.947
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.812
SPEF2
Sperm flagellar 2.
   
 
 0.664
LRGUK
Uncharacterized protein.
    
 
 0.656
TMEM177
Transmembrane protein 177.
    
 
 0.625
U3IJ22_ANAPP
Uncharacterized protein.
    
 
 0.619
SPAG17
Sperm associated antigen 17.
    
 
 0.619
CFAP57
Cilia and flagella associated protein 57.
    
 
 0.614
CFAP43
Cilia and flagella associated protein 43.
   
  
 0.602
RCL1
RNA terminal phosphate cyclase like 1.
      
 0.601
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.