STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMYD1SET and MYND domain containing 1. (491 aa)    
Predicted Functional Partners:
MYOM2
Myomesin 2.
   
 0.931
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.910
MYOZ2
Myozenin 2.
   
  
 0.907
ENSAPLP00000024705
EHD_N domain-containing protein.
   
 
 0.867
ADSS2
Adenylosuccinate synthetase isozyme 2; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
    
 
 0.785
ENSAPLP00000028245
Uncharacterized protein.
    
 0.751
CSRP3
Cysteine and glycine rich protein 3.
   
 
 0.751
APOBEC2
Apolipoprotein B mRNA editing enzyme catalytic subunit 2.
   
    0.750
HAND2
Heart and neural crest derivatives expressed 2.
    
 0.748
ZBTB44
Zinc finger and BTB domain containing 44.
    
 
 0.694
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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