STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOLD1Apolipoprotein L domain containing 1. (234 aa)    
Predicted Functional Partners:
SDK1
Sidekick cell adhesion molecule 1.
     
 0.670
BICC1
BicC family RNA binding protein 1.
      
 0.670
SLC35F1
Solute carrier family 35 member F1.
      
 0.667
OGFOD1
2-oxoglutarate and iron dependent oxygenase domain containing 1.
      
 0.606
ZNF516
Zinc finger protein 516.
    
 0.584
RASD2
RASD family member 2.
    
 0.572
ENSAPLP00000026494
Uncharacterized protein.
     
 0.554
MAP3K19
Mitogen-activated protein kinase kinase kinase 19.
    
 
 0.546
IGSF10
Immunoglobulin superfamily member 10.
     
 0.518
LAMA5
Laminin subunit alpha 5.
    
 
 0.513
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.