STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GNB1LG protein subunit beta 1 like. (328 aa)    
Predicted Functional Partners:
TTI1
TELO2 interacting protein 1.
    
 
 0.875
TELO2
Telomere maintenance 2.
    
 
 0.718
GP1BB
Glycoprotein Ib platelet subunit beta.
    
 
 0.678
DGCR8
DGCR8 microprocessor complex subunit.
      
 0.661
RANBP1
RAN binding protein 1.
    
 0.614
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 
 0.602
ITM2B
Integral membrane protein 2B.
      
 0.590
SYAP1
Synapse associated protein 1.
      
 0.580
NDC80
NDC80 kinetochore complex component.
   
 
 0.554
CTSO
Cathepsin O; Belongs to the peptidase C1 family.
     
 0.551
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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