Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
TCEANCTranscription elongation factor A N-terminal and central domain containing. (373 aa)    
Predicted Functional Partners:
POLR2E
RNA polymerase II subunit E.
   
 0.783
POLR2C
RNA polymerase II subunit C.
   
 0.778
POLR2K
RNA polymerase II subunit K.
   
 0.774
POLR2H
RNA polymerase II subunit H.
   
 0.765
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.759
POLR2D
RPOL4c domain-containing protein.
   
 0.752
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.746
SUPT4H1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
   
 0.742
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.739
POLR2F
RNA polymerase II subunit F.
   
 0.735
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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