STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SENP8SUMO peptidase family member, NEDD8 specific. (212 aa)    
Predicted Functional Partners:
CUL1
Cullin 1; Belongs to the cullin family.
    
 
 0.878
ACMSD
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). Belongs to the metallo-dependent hydrolases superfamily.
    
 0.810
PIGL
Phosphatidylinositol glycan anchor biosynthesis class L.
    
 0.808
ACO1
Aconitase 1; Belongs to the aconitase/IPM isomerase family.
  
 
 0.770
IREB2
Iron responsive element binding protein 2; Belongs to the aconitase/IPM isomerase family.
  
 
 0.770
ACO2
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 
 0.770
PSTPIP2
Proline-serine-threonine phosphatase interacting protein 2.
    
   0.749
UCHL3
Ubiquitin carboxyl-terminal hydrolase.
    
 0.741
UCHL1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.741
PSMD7
Proteasome 26S subunit, non-ATPase 7.
   
 0.704
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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