STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM41BTransmembrane protein 41B. (279 aa)    
Predicted Functional Partners:
VMP1
Vacuole membrane protein 1.
    
 
 0.860
MINAR1
Membrane integral NOTCH2 associated receptor 1.
      
 0.730
TMEM64
Transmembrane protein 64.
      
 0.656
APOB
Apolipoprotein B.
   
   0.608
ANKLE2
Ankyrin repeat and LEM domain containing 2.
   
  
 0.575
TMEM106B
Transmembrane protein 106B.
      
 0.572
RUSC2
RUN and SH3 domain containing 2.
     
 0.569
LPCAT3
Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family.
   
  
 0.563
TMEM43
Transmembrane protein 43.
    
   0.559
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
      
 0.558
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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