STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3I3T1_ANAPPUncharacterized protein. (1068 aa)    
Predicted Functional Partners:
ENSAPLP00000032406
KH domain-containing protein.
 
      0.900
NRROS
Uncharacterized protein.
   
  
 0.585
RECQL4
RecQ like helicase 4.
    
   0.559
C3orf67
Chromosome 3 open reading frame 67.
      
 0.544
SLC4A9
Anion exchange protein.
      
 0.544
C22orf39
Chromosome 22 open reading frame 39.
    
 
 0.468
SUSD2
Sushi domain containing 2.
      
 0.464
MGA
MAX dimerization protein MGA.
   
    0.458
TNFAIP3
TNF alpha induced protein 3.
    
 
 0.455
NIPBL
Nipped-B protein.
   
    0.440
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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