STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3I3U3_ANAPPUncharacterized protein. (279 aa)    
Predicted Functional Partners:
SRPK1
SRSF protein kinase 1.
    
 0.960
SRSF2
RRM domain-containing protein.
   
0.942
U3J272_ANAPP
RRM domain-containing protein.
   
0.939
U2AF1
Uncharacterized protein.
   
 0.932
PABPN1L
Poly(A) binding protein nuclear 1 like, cytoplasmic.
   
 0.931
SRSF1
Uncharacterized protein.
   
0.927
ZRSR2
Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.
   
 0.921
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.920
SLU7
SLU7 homolog, splicing factor.
    
 0.913
SRSF11
Serine and arginine rich splicing factor 11.
   
 0.901
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.