STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT16Synaptotagmin 16. (586 aa)    
Predicted Functional Partners:
C3orf67
Chromosome 3 open reading frame 67.
      
 0.545
KCNJ4
Potassium voltage-gated channel subfamily J member 4.
      
 0.544
ENSAPLP00000030606
IMD domain-containing protein.
   
  
 0.483
STX1A
Syntaxin 1A; Belongs to the syntaxin family.
    
 0.475
STX3
t-SNARE coiled-coil homology domain-containing protein.
    
 0.475
STX2
Syntaxin 2; Belongs to the syntaxin family.
    
 0.475
STX1B
Syntaxin 1B.
    
 0.475
GOLT1B
Golgi transport 1B.
      
 0.460
TMEM79
Transmembrane protein 79.
    
 
 0.451
SYT13
Synaptotagmin 13.
      
 0.442
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.