STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPHP4Nephrocystin 4. (1287 aa)    
Predicted Functional Partners:
NPHP1
Nephrocystin 1.
   
 0.966
RPGRIP1L
RPGRIP1 like.
    
 0.918
INVS
Inversin.
      
 0.756
RPGR
Retinitis pigmentosa GTPase regulator.
   
 
 0.739
NEK8
Uncharacterized protein.
   
  
 0.701
LATS1
Large tumor suppressor kinase 1.
    
 0.659
SHROOM3
Shroom family member 3.
   
  
 0.638
FMNL1
Formin like 1.
    
 0.631
FMNL3
FH2 domain-containing protein.
    
 0.631
FMNL2
Formin like 2.
    
 0.631
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.