Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC42Leucine rich repeat containing 42. (158 aa)    
Predicted Functional Partners:
RPL36AL
Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family.
      
 0.685
ENSAPLP00000032311
Uncharacterized protein.
      
 0.669
TCEANC2
Transcription elongation factor A N-terminal and central domain containing 2.
      
 0.664
DCAF5
DDB1 and CUL4 associated factor 5.
      
 0.664
EXD2
Exonuclease 3'-5' domain containing 2.
      
 0.643
PPP1R14D
Uncharacterized protein.
      
 0.641
RIC8B
RIC8 guanine nucleotide exchange factor B.
      
 0.621
IQCB1
IQ motif containing B1.
      
 0.596
FANCB
FA complementation group B.
      
 0.596
MPLKIP
M-phase specific PLK1 interacting protein.
      
 0.565
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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