STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC42Leucine rich repeat containing 42. (158 aa)    
Predicted Functional Partners:
RPL36AL
Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family.
      
 0.499
HSF2BP
Heat shock transcription factor 2 binding protein.
      
 0.469
MPLKIP
M-phase specific PLK1 interacting protein.
      
 0.457
PPP1R14D
Uncharacterized protein.
      
 0.440
SYCE2
Synaptonemal complex central element protein 2.
      
 0.438
SPATA22
Spermatogenesis associated 22.
      
 0.437
ZFPM1
Zinc finger protein, FOG family member 1.
      
 0.433
MYOZ2
Myozenin 2.
      
 0.432
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.