STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUGP1SURP and G-patch domain containing 1. (627 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
   
 0.968
RBM17
RNA binding motif protein 17.
   
 
 0.944
RBM5
RNA binding motif protein 5.
   
 0.762
RBM6
RNA binding motif protein 6.
   
 0.762
NR2C2AP
Nuclear receptor 2C2 associated protein.
      
 0.747
SLC35E1
Solute carrier family 35 member E1.
      
 0.747
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
   
 
 0.672
SLC25A42
Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.635
TM4SF1
Transmembrane 4 L six family member 1.
   
  
 0.633
SRRM3
Serine/arginine repetitive matrix 3.
   
 
 0.622
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.