STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC18Coiled-coil domain containing 18. (1234 aa)    
Predicted Functional Partners:
CCDC14
Coiled-coil domain containing 14.
   
 
 0.820
PRPF19
Pre-mRNA processing factor 19.
    
 
 0.615
CCDC13
Uncharacterized protein.
    
 
 0.609
PARPBP
PARP1 binding protein.
   
  
 0.605
UACA
Uveal autoantigen with coiled-coil domains and ankyrin repeats.
  
 
 
 0.562
KIAA0753
KIAA0753.
      
 0.550
SFXN4
Sideroflexin 4.
      
 0.549
EXD3
Exonuclease 3'-5' domain containing 3.
    
 
 0.549
CEP126
Centrosomal protein 126.
      
 0.548
CCDC12
Coiled-coil domain containing 12.
      
 0.548
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.