STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RALGAPBRal GTPase activating protein non-catalytic beta subunit. (1507 aa)    
Predicted Functional Partners:
RALGAPA1
Ral GTPase activating protein catalytic alpha subunit 1.
   
0.698
RALGAPA2
Ral GTPase activating protein catalytic alpha subunit 2.
   
0.698
ZMAT2
Zinc finger matrin-type 2.
      
 0.635
FBXW2
F-box and WD repeat domain containing 2.
   
 
 0.624
POLDIP3
DNA polymerase delta interacting protein 3.
      
 0.611
MED21
Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
      
 0.611
PSMC6
Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family.
      
 0.602
SNX4
Sorting nexin 4.
      
 0.602
ENSAPLP00000017494
Uncharacterized protein.
      
 0.594
ENSAPLP00000024468
Uncharacterized protein.
      
 0.594
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.