Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
USP1Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family. (303 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
    
 0.999
FANCD2
Uncharacterized protein.
    
 0.991
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.990
FANCL
FA complementation group L.
     
 0.980
FANCI
FA complementation group I.
   
 0.970
RAD51AP1
RAD51 associated protein 1.
   
 
 0.959
PHLPP1
PH domain and leucine rich repeat protein phosphatase 1.
    
 
 0.948
RPS27A
Ubiquitin-like domain-containing protein.
    
  0.905
ENSAPLP00000023897
Uncharacterized protein.
    
 0.896
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
    
 0.884
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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