STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYPNMyopalladin. (1342 aa)    
Predicted Functional Partners:
CAPN3
Calpain 3; Belongs to the peptidase C2 family.
   
 0.630
ANKRD1
Ankyrin repeat domain 1.
   
 0.624
ACTN2
Actinin alpha 2.
   
 0.621
TMOD4
Tropomodulin 4.
   
 
 0.608
COL6A1
VWFA domain-containing protein.
    
 0.589
PRRX2
Paired related homeobox 2.
    
 
 0.587
THBS1
Thrombospondin 1.
    
 0.587
WDR18
WD repeat domain 18.
   
 0.585
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.584
TGFB3
Transforming growth factor beta 3.
      
 0.583
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.