STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGSHN-sulfoglucosamine sulfohydrolase. (500 aa)    
Predicted Functional Partners:
HGSNAT
Heparan-alpha-glucosaminide N-acetyltransferase.
     
 0.957
IDUA
Iduronidase alpha-L-.
   
 0.954
SUMF1
Sulfatase modifying factor 1.
   
 0.939
NAGLU
N-acetyl-alpha-glucosaminidase.
   
  
 0.877
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
      
 0.846
IDS
Sulfatase domain-containing protein.
  
 
 
 0.712
MANBA
Mannosidase beta.
   
 
 0.687
ARSA
Sulfatase domain-containing protein.
  
 0.670
ENSAPLP00000020948
Sulfatase domain-containing protein.
  
 0.669
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
     
 0.668
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.