STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MOSMOModulator of smoothened. (167 aa)    
Predicted Functional Partners:
U3I4W6_ANAPP
VWFA domain-containing protein.
 
    
 0.815
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
      
 0.642
ATRN
Attractin.
    
 
 0.627
ATRNL1
Attractin like 1.
    
 
 0.627
TDG
Thymine DNA glycosylase.
      
 0.601
RNF157
Ring finger protein 157.
    
 
 0.574
SETD5
SET domain containing 5.
      
 0.566
CLDN19
Claudin 19.
      
 0.545
POLR3E
RNA polymerase III subunit E.
      
 0.485
IFT80
Intraflagellar transport 80.
      
 0.480
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.