Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCUBE2Signal peptide, CUB domain and EGF like domain containing 2. (967 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interaction domain 4B.
    
 0.700
SHH
Sonic hedgehog signaling molecule.
    
 0.625
ADAMTS18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
   
 0.588
IRX3
Iroquois homeobox 3.
    
 
 0.571
HIVEP3
Human immunodeficiency virus type I enhancer binding protein 3.
    
 0.566
USH1C
USH1 protein network component harmonin.
    
 0.559
C1QL3
Complement C1q like 3.
    
 0.554
SALL4
Spalt like transcription factor 4.
      
 0.546
SELENOS
Uncharacterized protein.
      
 0.544
IHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.533
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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