STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCUBE2Signal peptide, CUB domain and EGF like domain containing 2. (967 aa)    
Predicted Functional Partners:
SHH
Sonic hedgehog signaling molecule.
    
 0.661
CDON
Cell adhesion associated, oncogene regulated.
    
 0.642
BOC
BOC cell adhesion associated, oncogene regulated.
    
 0.642
PTCH1
Patched 1.
   
  
 0.612
HHIP
Hedgehog interacting protein.
    
 0.604
HHAT
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
      
 0.595
ENSAPLP00000019355
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
      
 0.595
SMO
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 
 0.568
CBLN2
Cerebellin 2 precursor.
    
 0.566
BTF3L4
Transcription factor BTF3; Belongs to the NAC-beta family.
    
 
 0.553
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.