Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TBC1D15TBC1 domain family member 15. (667 aa)    
Predicted Functional Partners:
RAB7A
RAB7A, member RAS oncogene family.
    
 0.986
U3J047_ANAPP
Uncharacterized protein.
   
 0.970
OPTN
Optineurin.
   
 0.817
FUNDC1
FUN14 domain containing 1.
      
 0.764
ZNF536
Zinc finger protein 536.
      
 0.754
BNIP3
BCL2 interacting protein 3.
      
 0.749
ENSAPLP00000020487
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
    
 
 0.706
RAB9B
RAB9B, member RAS oncogene family.
   
 0.677
RAB9A
RAB9A, member RAS oncogene family.
   
 0.677
SERGEF
Secretion regulating guanine nucleotide exchange factor.
   
  
 0.673
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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