STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D15TBC1 domain family member 15. (667 aa)    
Predicted Functional Partners:
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.971
RAB7A
RAB7A, member RAS oncogene family.
    
 0.968
U3J047_ANAPP
Uncharacterized protein.
   
 0.704
GABARAPL1
GABA type A receptor associated protein like 1.
   
 0.700
RAB9B
RAB9B, member RAS oncogene family.
   
 0.676
RAB9A
RAB9A, member RAS oncogene family.
   
 0.676
PPP4R1
Protein phosphatase 4 regulatory subunit 1.
      
 0.611
ENSAPLP00000020487
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
    
 
 0.595
PPP1R13B
Protein phosphatase 1 regulatory subunit 13B.
      
 0.594
ENSAPLP00000027504
SH3 domain-containing protein.
      
 0.594
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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