Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PBX3Homeobox domain-containing protein. (390 aa)    
Predicted Functional Partners:
HOXB1
Homeobox B1.
    
 0.801
PKNOX1
PBX/knotted 1 homeobox 1.
    
 0.794
HOXB6
Homeobox B6.
    
 0.780
HOXC4
Homeobox C4.
    
 0.754
HOXA1
Homeobox A1.
    
 0.741
HOXB7
Homeobox B7.
    
 0.734
HOXB5
Homeobox B5.
    
 0.688
HOXC9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
    
 
 0.684
PKNOX2
PBX/knotted 1 homeobox 2.
    
 0.677
HOXA9
Homeobox domain-containing protein.
    
 
 0.645
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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