STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VWC2Von Willebrand factor C domain containing 2. (331 aa)    
Predicted Functional Partners:
IFT140
Intraflagellar transport 140.
      
 0.689
TMEM43
Transmembrane protein 43.
      
 0.681
CCDC36
Coiled-coil domain containing 36.
      
 0.674
RAB11FIP3
RAB11 family interacting protein 3.
      
 0.673
TRAPPC6B
Trafficking protein particle complex 6B.
      
 0.662
KBTBD12
Kelch repeat and BTB domain containing 12.
      
 0.659
EML4
EMAP like 4.
      
 0.659
KCNG3
Potassium voltage-gated channel modifier subfamily G member 3; Belongs to the potassium channel family.
      
 0.656
SIPA1L2
Signal induced proliferation associated 1 like 2.
      
 0.649
PKDCC
Protein kinase domain containing, cytoplasmic.
     
 0.640
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.