STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMTC4Transmembrane O-mannosyltransferase targeting cadherins 4. (619 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.834
INTS1
Integrator complex subunit 1.
    
 0.821
INTS13
Integrator complex subunit 13.
   
 0.794
INTS10
Integrator complex subunit 10.
   
 0.733
INTS9
Integrator complex subunit 9.
   
 0.692
INTS11
Integrator complex subunit 11.
   
 0.678
TMEM237
Transmembrane protein 237.
    
 0.663
INTS12
Integrator complex subunit 12.
    
 0.658
TRIP4
Thyroid hormone receptor interactor 4.
      
 0.624
INTS4
Integrator complex subunit 4.
    
 0.619
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.