STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPRD1BRegulation of nuclear pre-mRNA domain containing 1B. (326 aa)    
Predicted Functional Partners:
RPRD1A
Regulation of nuclear pre-mRNA domain containing 1A.
    
0.954
RPAP2
RNA polymerase II associated protein 2.
   
 0.896
ENSAPLP00000019176
annotation not available
    
 0.892
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.869
POLR2C
RNA polymerase II subunit C.
    
 0.808
POLR2D
RPOL4c domain-containing protein.
    
  0.793
XRN2
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
   
 
 0.786
POLR2F
RNA polymerase II subunit F.
    
 0.783
DRG2
Developmentally regulated GTP binding protein 2.
 
      0.772
POLR2E
RNA polymerase II subunit E.
    
  0.768
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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