Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TRABDTraB domain containing. (374 aa)    
Predicted Functional Partners:
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
      
 0.871
ENSAPLP00000025521
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
      
 0.871
U3IIG3_ANAPP
GOLD domain-containing protein.
      
 0.762
RBM12B
RNA binding motif protein 12B.
      
 0.691
TBC1D22A
TBC1 domain family member 22A.
      
 0.675
LARGE2
LARGE xylosyl- and glucuronyltransferase 2.
      
 0.668
ENSAPLP00000021904
Uncharacterized protein.
      
 0.655
ENSAPLP00000026901
annotation not available
      
 0.655
U3I1J3_ANAPP
Uncharacterized protein.
 
      0.654
ENSAPLP00000025156
Uncharacterized protein.
      
 0.622
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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