SH3BP5 protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SH3BP5

SH3 domain binding protein 5. (402 aa)

Predicted Functional Partners:

TRAPPC10

0.721

METTL6

0.702

USP10

0.691

ENSAPLP00000030961

0.686

RAB11B

0.672

RAB11A

0.672

ENSAPLP00000026086

0.672

G3BP1

0.664

TNKS

0.662

ATP2B4

0.658

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP2B4	ENSAPLP00000030961	ENSAPLP00000030663	ENSAPLP00000030961	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	Uncharacterized protein.	0.412
ATP2B4	SH3BP5	ENSAPLP00000030663	ENSAPLP00000002274	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	SH3 domain binding protein 5.	0.658
ENSAPLP00000026086	SH3BP5	ENSAPLP00000026086	ENSAPLP00000002274	Uncharacterized protein.	SH3 domain binding protein 5.	0.672
ENSAPLP00000026086	TRAPPC10	ENSAPLP00000026086	ENSAPLP00000009838	Uncharacterized protein.	Foie-gras_1 domain-containing protein.	0.635
ENSAPLP00000030961	ATP2B4	ENSAPLP00000030961	ENSAPLP00000030663	Uncharacterized protein.	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.412
ENSAPLP00000030961	SH3BP5	ENSAPLP00000030961	ENSAPLP00000002274	Uncharacterized protein.	SH3 domain binding protein 5.	0.686
G3BP1	SH3BP5	ENSAPLP00000031794	ENSAPLP00000002274	G3BP stress granule assembly factor 1.	SH3 domain binding protein 5.	0.664
G3BP1	USP10	ENSAPLP00000031794	ENSAPLP00000023444	G3BP stress granule assembly factor 1.	Ubiquitin carboxyl-terminal hydrolase.	0.983
METTL6	SH3BP5	ENSAPLP00000002552	ENSAPLP00000002274	Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.	SH3 domain binding protein 5.	0.702
RAB11A	RAB11B	ENSAPLP00000014824	ENSAPLP00000010780	RAB11A, member RAS oncogene family.	Uncharacterized protein.	0.900
RAB11A	SH3BP5	ENSAPLP00000014824	ENSAPLP00000002274	RAB11A, member RAS oncogene family.	SH3 domain binding protein 5.	0.672
RAB11A	TRAPPC10	ENSAPLP00000014824	ENSAPLP00000009838	RAB11A, member RAS oncogene family.	Foie-gras_1 domain-containing protein.	0.635
RAB11B	RAB11A	ENSAPLP00000010780	ENSAPLP00000014824	Uncharacterized protein.	RAB11A, member RAS oncogene family.	0.900
RAB11B	SH3BP5	ENSAPLP00000010780	ENSAPLP00000002274	Uncharacterized protein.	SH3 domain binding protein 5.	0.672
RAB11B	TRAPPC10	ENSAPLP00000010780	ENSAPLP00000009838	Uncharacterized protein.	Foie-gras_1 domain-containing protein.	0.635
SH3BP5	ATP2B4	ENSAPLP00000002274	ENSAPLP00000030663	SH3 domain binding protein 5.	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.	0.658
SH3BP5	ENSAPLP00000026086	ENSAPLP00000002274	ENSAPLP00000026086	SH3 domain binding protein 5.	Uncharacterized protein.	0.672
SH3BP5	ENSAPLP00000030961	ENSAPLP00000002274	ENSAPLP00000030961	SH3 domain binding protein 5.	Uncharacterized protein.	0.686
SH3BP5	G3BP1	ENSAPLP00000002274	ENSAPLP00000031794	SH3 domain binding protein 5.	G3BP stress granule assembly factor 1.	0.664
SH3BP5	METTL6	ENSAPLP00000002274	ENSAPLP00000002552	SH3 domain binding protein 5.	Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.	0.702