STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YLPM1YLP motif containing 1. (2207 aa)    
Predicted Functional Partners:
RABGEF1
Uncharacterized protein.
   
 
  0.605
ENSAPLP00000018986
PKS_AT domain-containing protein.
      
 0.602
DOCK7
Uncharacterized protein; Belongs to the DOCK family.
      
 0.592
DOCK7-2
DHR-2 domain-containing protein; Belongs to the DOCK family.
      
 0.592
FCF1
FCF1 rRNA-processing protein.
 
   
 0.538
RBM12B
RNA binding motif protein 12B.
      
 0.497
ZNF318
Zinc finger protein 318.
   
  
 0.493
HEATR1
HEAT repeat containing 1.
      
 0.447
STK10
Serine/threonine kinase 10.
      
 0.430
DEGS2
Delta 4-desaturase, sphingolipid 2.
      
 0.426
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.