Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IQCB1IQ motif containing B1. (765 aa)    
Predicted Functional Partners:
CEP290
Centrosomal protein 290.
   
 0.995
HAUS8
HAUS augmin like complex subunit 8.
     
 0.808
HEATR5A
HEAT repeat containing 5A.
   
 
 0.781
TNS1
Tensin 1.
      
 0.717
NPHP1
Nephrocystin 1.
    
 0.716
USP9X
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 
 0.713
RPGR
Retinitis pigmentosa GTPase regulator.
   
 
 0.705
INVS
Inversin.
   
 0.691
NPAT
Nuclear protein, coactivator of histone transcription.
   
 
 0.678
FANCB
FA complementation group B.
      
 0.666
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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