STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQCB1IQ motif containing B1. (765 aa)    
Predicted Functional Partners:
CEP290
Centrosomal protein 290.
    
 
 0.852
HEATR5A
HEAT repeat containing 5A.
      
 0.806
HAUS8
HAUS augmin like complex subunit 8.
     
 0.698
TNS1
Tensin 1.
      
 0.676
U3I7N4_ANAPP
Uncharacterized protein.
    
 
 0.625
SPATA7
Spermatogenesis associated 7.
      
 0.623
RAB3IP
Sec2p domain-containing protein.
    
 0.621
RPGR
Retinitis pigmentosa GTPase regulator.
   
 
 0.617
RPGRIP1L
RPGRIP1 like.
    
 
 0.614
RD3
Retinal degeneration 3, GUCY2D regulator.
      
 0.611
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.