STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PATJUncharacterized protein. (640 aa)    
Predicted Functional Partners:
AMOT
Angiomotin.
    
 0.975
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
    
 0.974
AMOTL2
Angiomotin_C domain-containing protein.
   
 0.922
PARD3
Par-3 family cell polarity regulator.
    
0.918
ARHGEF18
Uncharacterized protein.
   
 0.912
CRB1
Crumbs cell polarity complex component 1.
    
 
 0.626
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.526
CDC42
Cell division cycle 42.
    
 0.512
IFT57
Intraflagellar transport 57.
    
 0.510
IFT80
Intraflagellar transport 80.
    
 0.506
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.