Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARVCFARVCF delta catenin family member. (981 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.879
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.821
CDH5
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.810
ENSAPLP00000029619
Uncharacterized protein.
 
    
0.778
JUP
Junction plakoglobin.
   
 0.770
ZBTB33
Zinc finger and BTB domain containing 33.
    
 
 0.761
CDH1
Uncharacterized protein.
   
 0.739
CDH3
Uncharacterized protein.
   
 0.739
CDH11
Cadherin 11; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.726
CDH7
Cadherin 7; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.670
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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