Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
SEC61GSEC61 translocon gamma subunit. (66 aa)    
Predicted Functional Partners:
SEC61B
SEC61 translocon beta subunit.
   
 0.999
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.991
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 0.990
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 0.990
RPL27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
   0.962
RPL26
Ribosomal protein L26.
   
 
 0.961
RPS25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.959
RPL34
Ribosomal protein L34.
   
   0.956
RPL37
Ribosomal protein L37; Binds to the 23S rRNA.
   
   0.954
RPL24
Ribosomal protein L24.
   
   0.952
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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