STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNDIG1Synapse differentiation inducing 1. (258 aa)    
Predicted Functional Partners:
FUNDC2
FUN14 domain containing 2.
      
 0.621
NAV2
Neuron navigator 2.
   
  
 0.614
SNRPD1
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
      
 0.611
MANEA
Mannosidase endo-alpha.
      
 0.611
WSCD1
WSC domain containing 1.
      
 0.611
SLC37A1
Solute carrier family 37 member 1.
      
 0.611
MPZL1
Myelin protein zero like 1.
      
 0.611
CMIP
C-Maf inducing protein.
      
 0.610
RASGEF1B
RasGEF domain family member 1B.
      
 0.609
LINGO2
Leucine rich repeat and Ig domain containing 2.
   
  
 0.589
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.