Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1QBComplement C1q B chain. (301 aa)    
Predicted Functional Partners:
C1QC
Complement C1q C chain.
  
0.999
C1QA
Complement C1q A chain.
  
 
0.987
C1S
Complement C1s; Belongs to the peptidase S1 family.
   
 0.948
PTX3
Pentraxin 3.
    
 
 0.948
CALR3
Calreticulin.
    
  0.903
MEGF10
Multiple EGF like domains 10.
     
  0.901
MEGF11
Multiple EGF like domains 11.
     
 0.901
LRP1
Uncharacterized protein.
     
  0.901
SCARF1
Scavenger receptor class F member 1.
     
  0.901
C1R
Complement C1r; Belongs to the peptidase S1 family.
   
 0.884
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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